ponedeljek, 27. maj 2024 Nedim ŠIŠIĆ: Comparison of brain MRI segmentation pipelines

V ponedeljek, 27. maja 2024, bo ob 16.00 uri izvedeno
predavanje v okviru PONEDELJKOVEGA SEMINARJA RAČUNALNIŠTVA IN INFORMATIKE
Oddelkov za Informacijske znanosti in tehnologije UP FAMNIT in UP IAM.

ČAS/PROSTOR: 27. maj 2024 ob 16.00 v FAMNIT-VP2.

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PREDAVATELJ: Nedim ŠIŠIĆ
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Nedim Šišić is a second-year PhD student at UP FAMNIT under the mentorship of Assist. Prof. Peter Rogelj. His PhD research concerns neural networks in medical imaging, specifically in segmentation of brain MRI.

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NASLOV: Comparison of brain MRI segmentation pipelines
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POVZETEK:

Magnetic resonance imaging (MRI) is frequently used in clinical trials to estimate longitudinal brain volume changes in order to asses treatment effect in neurological disorders such as Alzheimer's Disease and Multiple Sclerosis. A standard pre-processing step in volume estimation involves segmentation of MRI into distinct brain structures, and a large number of automated brain segmentation tools/pipelines have thus been developed. The seminar will present a comparison of six segmentation pipelines frequently used in clinical trials: FreeSurfer, SamSeg, FastSurfer, SIENAX, SPM12, and CAT12 on healthy controls and patients with Alzheimer’s disease and multiple sclerosis. The project was conducted as part of an internship at F. Hoffmann-La Roche, a pharmaceutical company currently developing drugs for various neurological diseases.

Seminar bo potekal v angleškem jeziku v FAMNIT-VP2 s pričetkom ob 16:00 uri.

Vabljeni.